Dca28989.1
Annotation
- 2-exons
- f-3
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold28942)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28989.1 |
1 |
310 |
335 |
70.74 |
310 |
70 |
2e-136
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
522 |
863 |
1501 |
22.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca28989.1 |
5 |
310 |
335 |
42.38 |
306 |
43 |
3e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
216 |
552 |
707 |
47.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold28942 |
Augustus |
mRNA |
1 |
1107 |
. |
+ |
. |
ID=Dca28989.1;Parent=Dca28989 |
| scaffold28942 |
Augustus |
exon |
1 |
718 |
. |
+ |
. |
ID=Dca28989.1.exon1;Parent=Dca28989.1 |
| scaffold28942 |
Augustus |
exon |
816 |
1107 |
. |
+ |
. |
ID=Dca28989.1.exon2;Parent=Dca28989.1 |
