Carnation DB

Dca29004.1

Annotation

7-exons
f-1
sp|F6H6H0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0050g02330#unknown#0F0P0C
sp|B9SJM1_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0763930#unknown#0F0P0C
Repeat List (scaffold2897)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29004.1	2	165	735	9.79	164	42	3e-30
Target_name	Start	End	Length	Cov(%)
sp\|F6H6H0_VITVI	37	211	1135	15.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29004.1	2	165	735	8.16	164	35	3e-20
Target_name	Start	End	Length	Cov(%)
AT1G65810.1	43	217	1050	16.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2897	Augustus	mRNA	1668	5312	.	-	.	ID=Dca29004.1;Parent=Dca29004
scaffold2897	Augustus	exon	1668	1776	.	-	.	ID=Dca29004.1.exon1;Parent=Dca29004.1
scaffold2897	Augustus	exon	1870	2237	.	-	.	ID=Dca29004.1.exon2;Parent=Dca29004.1
scaffold2897	Augustus	exon	2518	2740	.	-	.	ID=Dca29004.1.exon3;Parent=Dca29004.1
scaffold2897	Augustus	exon	2832	3093	.	-	.	ID=Dca29004.1.exon4;Parent=Dca29004.1
scaffold2897	Augustus	exon	3179	3491	.	-	.	ID=Dca29004.1.exon5;Parent=Dca29004.1
scaffold2897	Augustus	exon	3597	4033	.	-	.	ID=Dca29004.1.exon6;Parent=Dca29004.1
scaffold2897	Augustus	exon	4817	5312	.	-	.	ID=Dca29004.1.exon7;Parent=Dca29004.1