Carnation DB

Dca29082.1

Annotation

5-exons
f-1
sp|D7TVZ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g03460#unknown#0F0P0C
AT4G23330.1 | Symbols: | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:12192136-12194745 FORWARD LENGTH=270
Repeat List (scaffold29)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29082.1	13	123	123	64.22	111	72	1e-43
Target_name	Start	End	Length	Cov(%)
sp\|D7TVZ1_VITVI	39	149	149	74.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29082.1	16	123	123	48.78	108	56	2e-33
Target_name	Start	End	Length	Cov(%)
Os07t0483400-01	38	145	146	73.97

seqname	source	feature	start	end	score	strand	frame	group
scaffold29	Augus-PASA	mRNA	331044	332948	.	-	.	ID=Dca29082.1;Parent=Dca29082
scaffold29	Augus-PASA	exon	331044	331110	.	-	.	ID=Dca29082.1.exon1;Parent=Dca29082.1
scaffold29	Augus-PASA	exon	331283	331327	.	-	.	ID=Dca29082.1.exon2;Parent=Dca29082.1
scaffold29	Augus-PASA	exon	331728	331776	.	-	.	ID=Dca29082.1.exon3;Parent=Dca29082.1
scaffold29	Augus-PASA	exon	332644	332710	.	-	.	ID=Dca29082.1.exon4;Parent=Dca29082.1
scaffold29	Augus-PASA	exon	332805	332948	.	-	.	ID=Dca29082.1.exon5;Parent=Dca29082.1