Carnation DB

Dca29085.1

Annotation

6-exons
f-1
sp|B9HT50_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_833789#GO:0016021;GO:0005743;GO:0005488;GO:0055085#1F1P2C
AT3G55640.1 | Symbols: | Mitochondrial substrate carrier family protein | chr3:20640048-20642411 FORWARD LENGTH=332
Repeat List (scaffold29)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29085.1	39	225	256	23.43	187	32	1e-11
Target_name	Start	End	Length	Cov(%)
sp\|B9HT50_POPTR	149	327	337	53.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29085.1	1	254	256	65.23	254	66	9e-95
Target_name	Start	End	Length	Cov(%)
AT3G55640.1	3	252	332	75.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold29	Augus-PASA	mRNA	342692	344829	.	+	.	ID=Dca29085.1;Parent=Dca29085
scaffold29	Augus-PASA	exon	342692	342886	.	+	.	ID=Dca29085.1.exon1;Parent=Dca29085.1
scaffold29	Augus-PASA	exon	343418	343594	.	+	.	ID=Dca29085.1.exon2;Parent=Dca29085.1
scaffold29	Augus-PASA	exon	343729	343878	.	+	.	ID=Dca29085.1.exon3;Parent=Dca29085.1
scaffold29	Augustus	exon	344372	344473	.	+	.	ID=Dca29085.1.exon4;Parent=Dca29085.1
scaffold29	Augustus	exon	344583	344653	.	+	.	ID=Dca29085.1.exon5;Parent=Dca29085.1
scaffold29	Augustus	exon	344754	344829	.	+	.	ID=Dca29085.1.exon6;Parent=Dca29085.1