Carnation DB

Dca2911.1

Annotation

13-exons
f-1
sp|B9N1T1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1114983#GO:0005525;GO:0003924#2F0P0C
AT1G18070.3 | Symbols: | Translation elongation factor EF1A/initiation factor IF2gamma family protein | chr1:6214236-6218211 REVERSE LENGTH=543
Repeat List (scaffold110)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2911.1	12	413	703	42.1	402	73	1e-171
Target_name	Start	End	Length	Cov(%)
sp\|B9N1T1_POPTR	81	474	524	75.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2911.1	7	417	703	40.82	411	68	2e-164
Target_name	Start	End	Length	Cov(%)
AT1G18070.3	83	496	543	76.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold110	Augustus	mRNA	240156	249976	.	-	.	ID=Dca2911.1;Parent=Dca2911
scaffold110	Augustus	exon	240156	241088	.	-	.	ID=Dca2911.1.exon1;Parent=Dca2911.1
scaffold110	Augustus	exon	241367	241471	.	-	.	ID=Dca2911.1.exon2;Parent=Dca2911.1
scaffold110	Augustus	exon	244764	244828	.	-	.	ID=Dca2911.1.exon3;Parent=Dca2911.1
scaffold110	Augustus	exon	245017	245152	.	-	.	ID=Dca2911.1.exon4;Parent=Dca2911.1
scaffold110	Augustus	exon	245242	245347	.	-	.	ID=Dca2911.1.exon5;Parent=Dca2911.1
scaffold110	Augustus	exon	246159	246309	.	-	.	ID=Dca2911.1.exon6;Parent=Dca2911.1
scaffold110	Augustus	exon	246474	246538	.	-	.	ID=Dca2911.1.exon7;Parent=Dca2911.1
scaffold110	Augustus	exon	247308	247462	.	-	.	ID=Dca2911.1.exon8;Parent=Dca2911.1
scaffold110	Augustus	exon	247562	247624	.	-	.	ID=Dca2911.1.exon9;Parent=Dca2911.1
scaffold110	Augustus	exon	248618	248689	.	-	.	ID=Dca2911.1.exon10;Parent=Dca2911.1
scaffold110	Augustus	exon	248795	248840	.	-	.	ID=Dca2911.1.exon11;Parent=Dca2911.1
scaffold110	Augustus	exon	249070	249181	.	-	.	ID=Dca2911.1.exon12;Parent=Dca2911.1
scaffold110	Augustus	exon	249874	249976	.	-	.	ID=Dca2911.1.exon13;Parent=Dca2911.1