Carnation DB

Dca2913.1

Annotation

5-exons
f-1
sp|D7SN00_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0089g00360#GO:0003743#1F0P0C
sp|G7JKR1_MEDTR#Ligatin#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g030200#GO:0003743#1F0P0C
Repeat List (scaffold110)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2913.1	3	397	427	63.46	395	67	4e-150
Target_name	Start	End	Length	Cov(%)
sp\|D7SN00_VITVI	199	599	609	65.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2913.1	20	398	427	59.25	379	66	6e-139
Target_name	Start	End	Length	Cov(%)
Os02t0557600-01	208	594	604	64.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold110	Augus-PASA	mRNA	255995	258757	.	+	.	ID=Dca2913.1;Parent=Dca2913
scaffold110	Augus-PASA	exon	255995	256341	.	+	.	ID=Dca2913.1.exon1;Parent=Dca2913.1
scaffold110	Augus-PASA	exon	256587	256695	.	+	.	ID=Dca2913.1.exon2;Parent=Dca2913.1
scaffold110	Augus-PASA	exon	256834	257479	.	+	.	ID=Dca2913.1.exon3;Parent=Dca2913.1
scaffold110	Augustus	exon	257807	257894	.	+	.	ID=Dca2913.1.exon4;Parent=Dca2913.1
scaffold110	Augustus	exon	258664	258757	.	+	.	ID=Dca2913.1.exon5;Parent=Dca2913.1