Dca29225.1
Annotation
- 3-exons
- f-1
- sp|B9I4I3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_892576#GO:0016020;GO:0004222;GO:0006508#1F1P1C
- AT5G51740.1 | Symbols: | Peptidase family M48 family protein | chr5:21017110-21018987 FORWARD LENGTH=442
- Repeat List (scaffold2912)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29225.1 |
2 |
235 |
244 |
54.5 |
234 |
46 |
1e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I4I3_POPTR |
88 |
380 |
382 |
76.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29225.1 |
41 |
230 |
244 |
45.08 |
190 |
58 |
4e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G51740.1 |
245 |
435 |
442 |
43.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2912 |
Augustus |
mRNA |
29240 |
30189 |
. |
- |
. |
ID=Dca29225.1;Parent=Dca29225 |
| scaffold2912 |
Augustus |
exon |
29240 |
29507 |
. |
- |
. |
ID=Dca29225.1.exon1;Parent=Dca29225.1 |
| scaffold2912 |
Augustus |
exon |
29606 |
29754 |
. |
- |
. |
ID=Dca29225.1.exon2;Parent=Dca29225.1 |
| scaffold2912 |
Augustus |
exon |
29872 |
30189 |
. |
- |
. |
ID=Dca29225.1.exon3;Parent=Dca29225.1 |
