Dca29261.1
Annotation
- 3-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2919)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29261.1 |
131 |
1446 |
1729 |
38.51 |
1316 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
4 |
1393 |
1788 |
77.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29261.1 |
872 |
1429 |
1729 |
9.94 |
558 |
31 |
2e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
10 |
525 |
591 |
87.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2919 |
Augustus |
mRNA |
25486 |
33366 |
. |
+ |
. |
ID=Dca29261.1;Parent=Dca29261 |
| scaffold2919 |
Augustus |
exon |
25486 |
26055 |
. |
+ |
. |
ID=Dca29261.1.exon1;Parent=Dca29261.1 |
| scaffold2919 |
Augustus |
exon |
26148 |
29916 |
. |
+ |
. |
ID=Dca29261.1.exon2;Parent=Dca29261.1 |
| scaffold2919 |
Augustus |
exon |
32516 |
33366 |
. |
+ |
. |
ID=Dca29261.1.exon3;Parent=Dca29261.1 |
