Carnation DB

Dca29317.1

Annotation

5-exons
f-1
sp|A5AV98_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_015928#GO:0003676;GO:0008270;GO:0015074#2F1P0C
sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
Repeat List (scaffold2922)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29317.1	599	734	738	11.24	136	62	3e-39
Target_name	Start	End	Length	Cov(%)
sp\|A5AV98_VITVI	336	469	764	17.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29317.1	648	734	738	4.06	87	35	2e-13
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	549	636	1428	6.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2922	Augustus	mRNA	10829	15169	.	-	.	ID=Dca29317.1;Parent=Dca29317
scaffold2922	Augustus	exon	10829	11139	.	-	.	ID=Dca29317.1.exon1;Parent=Dca29317.1
scaffold2922	Augustus	exon	11446	11551	.	-	.	ID=Dca29317.1.exon2;Parent=Dca29317.1
scaffold2922	Augustus	exon	11634	11684	.	-	.	ID=Dca29317.1.exon3;Parent=Dca29317.1
scaffold2922	Augustus	exon	13126	14267	.	-	.	ID=Dca29317.1.exon4;Parent=Dca29317.1
scaffold2922	Augustus	exon	14563	15169	.	-	.	ID=Dca29317.1.exon5;Parent=Dca29317.1