Carnation DB

Dca29405.1

Annotation

5-exons
f-1
sp|E7BTN2_VITVI#Pectate lyase-like protein 1#Vitis vinifera (Grape)#unknown#GO:0016829#1F0P0C
Repeat List (scaffold293)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29405.1	39	494	500	60	456	65	3e-178
Target_name	Start	End	Length	Cov(%)
sp\|E7BTN2_VITVI	26	483	496	92.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29405.1	41	457	500	56.59	417	68	2e-163
Target_name	Start	End	Length	Cov(%)
AT3G53190.1	31	443	483	85.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold293	Augustus	mRNA	172220	174093	.	+	.	ID=Dca29405.1;Parent=Dca29405
scaffold293	Augustus	exon	172220	172395	.	+	.	ID=Dca29405.1.exon1;Parent=Dca29405.1
scaffold293	Augustus	exon	172479	173190	.	+	.	ID=Dca29405.1.exon2;Parent=Dca29405.1
scaffold293	Augustus	exon	173284	173475	.	+	.	ID=Dca29405.1.exon3;Parent=Dca29405.1
scaffold293	Augustus	exon	173566	173771	.	+	.	ID=Dca29405.1.exon4;Parent=Dca29405.1
scaffold293	Augustus	exon	173877	174093	.	+	.	ID=Dca29405.1.exon5;Parent=Dca29405.1