Carnation DB

Dca29474.1

Annotation

6-exons
f-1
sp|P93252_MESCR#Porin#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=VDAC#GO:0005741;GO:0008308#1F0P1C
Repeat List (scaffold2939)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29474.1	1	276	276	82.6	276	83	1e-134
Target_name	Start	End	Length	Cov(%)
sp\|P93252_MESCR	1	276	276	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29474.1	1	276	276	69.2	276	70	1e-112
Target_name	Start	End	Length	Cov(%)
AT3G01280.1	1	276	276	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2939	Augus-PASA	mRNA	60537	62935	.	-	.	ID=Dca29474.1;Parent=Dca29474
scaffold2939	Augus-PASA	exon	60537	60843	.	-	.	ID=Dca29474.1.exon1;Parent=Dca29474.1
scaffold2939	Augus-PASA	exon	61378	61586	.	-	.	ID=Dca29474.1.exon2;Parent=Dca29474.1
scaffold2939	Augus-PASA	exon	61682	61768	.	-	.	ID=Dca29474.1.exon3;Parent=Dca29474.1
scaffold2939	Augus-PASA	exon	62068	62178	.	-	.	ID=Dca29474.1.exon4;Parent=Dca29474.1
scaffold2939	Augus-PASA	exon	62706	62773	.	-	.	ID=Dca29474.1.exon5;Parent=Dca29474.1
scaffold2939	Augus-PASA	exon	62887	62935	.	-	.	ID=Dca29474.1.exon6;Parent=Dca29474.1