Dca29600.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2954)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29600.1 |
2 |
260 |
261 |
60.91 |
259 |
62 |
3e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
770 |
989 |
1501 |
14.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29600.1 |
2 |
243 |
261 |
32.95 |
242 |
36 |
5e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
796 |
998 |
1539 |
13.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2954 |
Augustus |
mRNA |
3689 |
4559 |
. |
+ |
. |
ID=Dca29600.1;Parent=Dca29600 |
| scaffold2954 |
Augustus |
exon |
3689 |
3955 |
. |
+ |
. |
ID=Dca29600.1.exon1;Parent=Dca29600.1 |
| scaffold2954 |
Augustus |
exon |
4041 |
4559 |
. |
+ |
. |
ID=Dca29600.1.exon2;Parent=Dca29600.1 |
