Dca29639.1
Annotation
- 3-exons
- f-1
- sp|D7LX47_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_661627#GO:0005622;GO:0008270#1F0P1C
- AT5G17790.1 | Symbols: VAR3 | zinc finger (Ran-binding) family protein | chr5:5869810-5872671 REVERSE LENGTH=758
- Repeat List (scaffold296)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29639.1 |
1 |
509 |
513 |
42.88 |
509 |
36 |
2e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LX47_ARALL |
202 |
759 |
759 |
73.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29639.1 |
59 |
493 |
513 |
26.31 |
435 |
31 |
2e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G17790.1 |
268 |
599 |
758 |
43.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold296 |
Augustus |
mRNA |
29123 |
31144 |
. |
- |
. |
ID=Dca29639.1;Parent=Dca29639 |
| scaffold296 |
Augustus |
exon |
29123 |
30341 |
. |
- |
. |
ID=Dca29639.1.exon1;Parent=Dca29639.1 |
| scaffold296 |
Augustus |
exon |
30417 |
30515 |
. |
- |
. |
ID=Dca29639.1.exon2;Parent=Dca29639.1 |
| scaffold296 |
Augustus |
exon |
30921 |
31144 |
. |
- |
. |
ID=Dca29639.1.exon3;Parent=Dca29639.1 |
