Dca29746.1
Annotation
- 3-exons
- f-1
- sp|A5BP26_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_034590#GO:0003676;GO:0008270#2F0P0C
- AT1G21280.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:7447690-7448403 REVERSE LENGTH=237
- Repeat List (scaffold297)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29746.1 |
9 |
224 |
340 |
25 |
216 |
40 |
8e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BP26_VITVI |
25 |
235 |
970 |
21.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29746.1 |
10 |
215 |
340 |
19.11 |
206 |
30 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
16 |
225 |
237 |
88.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold297 |
Augustus |
mRNA |
73732 |
75420 |
. |
- |
. |
ID=Dca29746.1;Parent=Dca29746 |
| scaffold297 |
Augustus |
exon |
73732 |
73751 |
. |
- |
. |
ID=Dca29746.1.exon1;Parent=Dca29746.1 |
| scaffold297 |
Augustus |
exon |
74304 |
74539 |
. |
- |
. |
ID=Dca29746.1.exon2;Parent=Dca29746.1 |
| scaffold297 |
Augustus |
exon |
74654 |
75420 |
. |
- |
. |
ID=Dca29746.1.exon3;Parent=Dca29746.1 |
