Carnation DB

Dca29762.1

Annotation

6-exons
f-1
sp|A5ALI6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013500#GO:0003676;GO:0008270;GO:0015074#2F1P0C
sp|Q9FLA4_ARATH#Polyprotein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold2970)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29762.1	182	420	1260	8.01	239	41	2e-39
Target_name	Start	End	Length	Cov(%)
sp\|A5ALI6_VITVI	64	304	1112	21.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca29762.1	423	1040	1260	16.82	618	32	1e-95
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	723	1374	1401	46.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2970	Augustus	mRNA	23338	30974	.	+	.	ID=Dca29762.1;Parent=Dca29762
scaffold2970	Augustus	exon	23338	23374	.	+	.	ID=Dca29762.1.exon1;Parent=Dca29762.1
scaffold2970	Augustus	exon	23920	25159	.	+	.	ID=Dca29762.1.exon2;Parent=Dca29762.1
scaffold2970	Augustus	exon	25829	26765	.	+	.	ID=Dca29762.1.exon3;Parent=Dca29762.1
scaffold2970	Augustus	exon	26872	27717	.	+	.	ID=Dca29762.1.exon4;Parent=Dca29762.1
scaffold2970	Augustus	exon	28826	29031	.	+	.	ID=Dca29762.1.exon5;Parent=Dca29762.1
scaffold2970	Augustus	exon	30458	30974	.	+	.	ID=Dca29762.1.exon6;Parent=Dca29762.1