Dca29841.1
Annotation
- 2-exons
- f-1
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold2981)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29841.1 |
1 |
191 |
191 |
65.96 |
191 |
54 |
1e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R2I1_ORYSJ |
828 |
1064 |
1064 |
22.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29841.1 |
58 |
184 |
191 |
25.65 |
127 |
39 |
2e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0432200-01 |
151 |
277 |
278 |
45.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2981 |
Augustus |
mRNA |
3866 |
4718 |
. |
+ |
. |
ID=Dca29841.1;Parent=Dca29841 |
| scaffold2981 |
Augustus |
exon |
3866 |
4051 |
. |
+ |
. |
ID=Dca29841.1.exon1;Parent=Dca29841.1 |
| scaffold2981 |
Augustus |
exon |
4329 |
4718 |
. |
+ |
. |
ID=Dca29841.1.exon2;Parent=Dca29841.1 |
