Dca29847.1
Annotation
- 3-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold2982)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29847.1 |
50 |
779 |
942 |
29.51 |
730 |
39 |
2e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
434 |
1150 |
1365 |
52.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca29847.1 |
74 |
559 |
942 |
16.87 |
486 |
33 |
2e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
365 |
850 |
857 |
56.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2982 |
Augustus |
mRNA |
13325 |
16960 |
. |
- |
. |
ID=Dca29847.1;Parent=Dca29847 |
| scaffold2982 |
Augustus |
exon |
13325 |
13818 |
. |
- |
. |
ID=Dca29847.1.exon1;Parent=Dca29847.1 |
| scaffold2982 |
Augustus |
exon |
13987 |
16260 |
. |
- |
. |
ID=Dca29847.1.exon2;Parent=Dca29847.1 |
| scaffold2982 |
Augustus |
exon |
16900 |
16960 |
. |
- |
. |
ID=Dca29847.1.exon3;Parent=Dca29847.1 |
