Carnation DB

Dca30.1

Annotation

7-exons
f-1
sp|B9GR36_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_644606#GO:0010181;GO:0004733;GO:0008615#2F1P0C
AT2G46580.1 | Symbols: | Pyridoxamine 5'-phosphate oxidase family protein | chr2:19129409-19130513 REVERSE LENGTH=198
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30.1	1	198	198	65.15	198	65	3e-74
Target_name	Start	End	Length	Cov(%)
sp\|B9GR36_POPTR	1	199	199	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30.1	6	198	198	62.12	193	64	7e-71
Target_name	Start	End	Length	Cov(%)
AT2G46580.1	5	198	198	97.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augus-PASA	mRNA	332447	335375	.	+	.	ID=Dca30.1;Parent=Dca30
scaffold1	Augus-PASA	exon	332447	332539	.	+	.	ID=Dca30.1.exon1;Parent=Dca30.1
scaffold1	Augus-PASA	exon	332637	332686	.	+	.	ID=Dca30.1.exon2;Parent=Dca30.1
scaffold1	Augus-PASA	exon	332790	332847	.	+	.	ID=Dca30.1.exon3;Parent=Dca30.1
scaffold1	Augus-PASA	exon	334076	334108	.	+	.	ID=Dca30.1.exon4;Parent=Dca30.1
scaffold1	Augus-PASA	exon	334271	334366	.	+	.	ID=Dca30.1.exon5;Parent=Dca30.1
scaffold1	Augus-PASA	exon	335023	335190	.	+	.	ID=Dca30.1.exon6;Parent=Dca30.1
scaffold1	Augus-PASA	exon	335277	335375	.	+	.	ID=Dca30.1.exon7;Parent=Dca30.1