Carnation DB

Dca3000.1

Annotation

7-exons
f-1
sp|F6HKA1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g05320#GO:0008168#1F0P0C
AT3G57000.1 | Symbols: | nucleolar essential protein-related | chr3:21092610-21094109 FORWARD LENGTH=298
Repeat List (scaffold1104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3000.1	1	279	279	65.94	279	66	2e-107
Target_name	Start	End	Length	Cov(%)
sp\|F6HKA1_VITVI	1	271	271	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3000.1	1	279	279	64.87	279	59	4e-96
Target_name	Start	End	Length	Cov(%)
AT3G57000.1	1	298	298	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1104	Augus-PASA	mRNA	53988	56347	.	-	.	ID=Dca3000.1;Parent=Dca3000
scaffold1104	Augus-PASA	exon	53988	54067	.	-	.	ID=Dca3000.1.exon1;Parent=Dca3000.1
scaffold1104	Augus-PASA	exon	54172	54229	.	-	.	ID=Dca3000.1.exon2;Parent=Dca3000.1
scaffold1104	Augus-PASA	exon	54393	54475	.	-	.	ID=Dca3000.1.exon3;Parent=Dca3000.1
scaffold1104	Augus-PASA	exon	54569	54679	.	-	.	ID=Dca3000.1.exon4;Parent=Dca3000.1
scaffold1104	Augus-PASA	exon	54772	54916	.	-	.	ID=Dca3000.1.exon5;Parent=Dca3000.1
scaffold1104	Augus-PASA	exon	55082	55174	.	-	.	ID=Dca3000.1.exon6;Parent=Dca3000.1
scaffold1104	Augustus	exon	56078	56347	.	-	.	ID=Dca3000.1.exon7;Parent=Dca3000.1