Carnation DB

Dca30000.1

Annotation

6-exons
f-1
sp|B9SH01_RICCO#Voltage-dependent anion-selective channel, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0580080#GO:0005741;GO:0008308#1F0P1C
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30000.1	1	275	275	54.54	275	55	2e-80
Target_name	Start	End	Length	Cov(%)
sp\|B9SH01_RICCO	1	276	276	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30000.1	1	275	275	51.27	275	47	5e-75
Target_name	Start	End	Length	Cov(%)
AT5G67500.2	1	303	303	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augus-PASA	mRNA	314261	316356	.	+	.	ID=Dca30000.1;Parent=Dca30000
scaffold3	Augus-PASA	exon	314261	314309	.	+	.	ID=Dca30000.1.exon1;Parent=Dca30000.1
scaffold3	Augus-PASA	exon	314424	314491	.	+	.	ID=Dca30000.1.exon2;Parent=Dca30000.1
scaffold3	Augus-PASA	exon	314945	315055	.	+	.	ID=Dca30000.1.exon3;Parent=Dca30000.1
scaffold3	Augus-PASA	exon	315436	315522	.	+	.	ID=Dca30000.1.exon4;Parent=Dca30000.1
scaffold3	Augus-PASA	exon	315748	315956	.	+	.	ID=Dca30000.1.exon5;Parent=Dca30000.1
scaffold3	Augus-PASA	exon	316053	316356	.	+	.	ID=Dca30000.1.exon6;Parent=Dca30000.1