Carnation DB

Dca30055.1

Annotation

5-exons
f-1
sp|D7MD33_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_912862#unknown#0F0P0C
AT2G37210.2 | Symbols: | lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=239
Repeat List (scaffold3)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30055.1	2	200	200	52.5	199	53	2e-47
Target_name	Start	End	Length	Cov(%)
sp\|D7MD33_ARALL	79	221	225	63.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30055.1	2	179	200	52	178	59	4e-48
Target_name	Start	End	Length	Cov(%)
AT2G37210.2	84	232	239	62.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3	Augustus	mRNA	882290	883618	.	-	.	ID=Dca30055.1;Parent=Dca30055
scaffold3	Augustus	exon	882290	882409	.	-	.	ID=Dca30055.1.exon1;Parent=Dca30055.1
scaffold3	Augustus	exon	882590	882733	.	-	.	ID=Dca30055.1.exon2;Parent=Dca30055.1
scaffold3	Augustus	exon	882831	882901	.	-	.	ID=Dca30055.1.exon3;Parent=Dca30055.1
scaffold3	Augustus	exon	883035	883196	.	-	.	ID=Dca30055.1.exon4;Parent=Dca30055.1
scaffold3	Augustus	exon	883513	883618	.	-	.	ID=Dca30055.1.exon5;Parent=Dca30055.1