Dca30072.1
Annotation
- 3-exons
- f-1
- sp|B9N3C8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_743774#GO:0030132;GO:0030130;GO:0005198;GO:0006886;GO:0016192#1F2P2C
- AT2G40060.1 | Symbols: | Clathrin light chain protein | chr2:16726564-16728001 FORWARD LENGTH=258
- Repeat List (scaffold30)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30072.1 |
13 |
236 |
240 |
60.41 |
224 |
57 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N3C8_POPTR |
44 |
295 |
324 |
77.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30072.1 |
4 |
197 |
240 |
47.91 |
194 |
55 |
8e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G40060.1 |
29 |
228 |
258 |
77.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30 |
Augustus |
mRNA |
2547 |
5003 |
. |
+ |
. |
ID=Dca30072.1;Parent=Dca30072 |
| scaffold30 |
Augustus |
exon |
2547 |
2743 |
. |
+ |
. |
ID=Dca30072.1.exon1;Parent=Dca30072.1 |
| scaffold30 |
Augustus |
exon |
4402 |
4555 |
. |
+ |
. |
ID=Dca30072.1.exon2;Parent=Dca30072.1 |
| scaffold30 |
Augustus |
exon |
4632 |
5003 |
. |
+ |
. |
ID=Dca30072.1.exon3;Parent=Dca30072.1 |
