Dca30087.1
Annotation
- 3-exons
- f-1
- sp|B9H2U2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_555791#unknown#0F0P0C
- Repeat List (scaffold30)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30087.1 |
27 |
295 |
304 |
51.97 |
269 |
58 |
2e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H2U2_POPTR |
23 |
293 |
306 |
88.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30087.1 |
35 |
258 |
304 |
42.76 |
224 |
57 |
3e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G32480.1 |
18 |
241 |
287 |
78.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30 |
Augustus |
mRNA |
114902 |
117783 |
. |
+ |
. |
ID=Dca30087.1;Parent=Dca30087 |
| scaffold30 |
Augustus |
exon |
114902 |
115162 |
. |
+ |
. |
ID=Dca30087.1.exon1;Parent=Dca30087.1 |
| scaffold30 |
Augustus |
exon |
116120 |
116348 |
. |
+ |
. |
ID=Dca30087.1.exon2;Parent=Dca30087.1 |
| scaffold30 |
Augustus |
exon |
117359 |
117783 |
. |
+ |
. |
ID=Dca30087.1.exon3;Parent=Dca30087.1 |
