Carnation DB

Dca3016.1

Annotation

5-exons
f-1
sp|B9T1K0_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0216620#GO:0016021#0F0P1C
Os01t0729100-02 Similar to uncharacterized conserved membrane protein.
Repeat List (scaffold1105)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3016.1	15	272	272	73.52	258	78	8e-117
Target_name	Start	End	Length	Cov(%)
sp\|B9T1K0_RICCO	63	320	320	80.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3016.1	15	272	272	72.42	258	74	4e-109
Target_name	Start	End	Length	Cov(%)
AT1G78620.2	75	342	342	78.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1105	Augustus	mRNA	44952	47689	.	-	.	ID=Dca3016.1;Parent=Dca3016
scaffold1105	Augustus	exon	44952	45044	.	-	.	ID=Dca3016.1.exon1;Parent=Dca3016.1
scaffold1105	Augustus	exon	45312	45416	.	-	.	ID=Dca3016.1.exon2;Parent=Dca3016.1
scaffold1105	Augustus	exon	45527	45650	.	-	.	ID=Dca3016.1.exon3;Parent=Dca3016.1
scaffold1105	Augustus	exon	46280	46533	.	-	.	ID=Dca3016.1.exon4;Parent=Dca3016.1
scaffold1105	Augustus	exon	47447	47689	.	-	.	ID=Dca3016.1.exon5;Parent=Dca3016.1