Dca30166.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold30044)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30166.1 |
1 |
216 |
230 |
57.39 |
216 |
62 |
3e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
834 |
896 |
20.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30166.1 |
27 |
213 |
230 |
25.65 |
187 |
32 |
9e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
378 |
532 |
1262 |
12.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30044 |
Augustus |
mRNA |
290 |
1053 |
. |
- |
. |
ID=Dca30166.1;Parent=Dca30166 |
| scaffold30044 |
Augustus |
exon |
290 |
606 |
. |
- |
. |
ID=Dca30166.1.exon1;Parent=Dca30166.1 |
| scaffold30044 |
Augustus |
exon |
678 |
1053 |
. |
- |
. |
ID=Dca30166.1.exon2;Parent=Dca30166.1 |
