Carnation DB

Dca30214.1

Annotation

11-exons
f-1
sp|A5BIU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g01420#GO:0003723;GO:0006396#1F1P0C
sp|G7L401_MEDTR#Exosome complex exonuclease RRP41#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g116920#GO:0004527;GO:0003723;GO:0006396#2F1P0C
Repeat List (scaffold301)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30214.1	1	240	241	89.62	240	90	1e-127
Target_name	Start	End	Length	Cov(%)
sp\|A5BIU1_VITVI	1	240	241	99.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30214.1	1	240	241	80.49	240	81	6e-112
Target_name	Start	End	Length	Cov(%)
Os09t0252000-00	1	242	243	99.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold301	Augus-PASA	mRNA	122585	126814	.	-	.	ID=Dca30214.1;Parent=Dca30214
scaffold301	Augus-PASA	exon	122585	122632	.	-	.	ID=Dca30214.1.exon1;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	122729	122818	.	-	.	ID=Dca30214.1.exon2;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	123210	123295	.	-	.	ID=Dca30214.1.exon3;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	123401	123517	.	-	.	ID=Dca30214.1.exon4;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	124199	124235	.	-	.	ID=Dca30214.1.exon5;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	124332	124410	.	-	.	ID=Dca30214.1.exon6;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	125226	125293	.	-	.	ID=Dca30214.1.exon7;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	125410	125448	.	-	.	ID=Dca30214.1.exon8;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	126456	126516	.	-	.	ID=Dca30214.1.exon9;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	126634	126680	.	-	.	ID=Dca30214.1.exon10;Parent=Dca30214.1
scaffold301	Augus-PASA	exon	126761	126814	.	-	.	ID=Dca30214.1.exon11;Parent=Dca30214.1