Dca30272.1
Annotation
- 4-exons
- f-1
- sp|A5CBM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001478#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold3018)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30272.1 |
58 |
733 |
740 |
36.75 |
676 |
37 |
3e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CBM0_VITVI |
153 |
828 |
1354 |
49.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30272.1 |
401 |
602 |
740 |
8.64 |
202 |
32 |
6e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
574 |
777 |
1428 |
14.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3018 |
Augustus |
mRNA |
34290 |
37001 |
. |
+ |
. |
ID=Dca30272.1;Parent=Dca30272 |
| scaffold3018 |
Augustus |
exon |
34290 |
35237 |
. |
+ |
. |
ID=Dca30272.1.exon1;Parent=Dca30272.1 |
| scaffold3018 |
Augustus |
exon |
35322 |
35502 |
. |
+ |
. |
ID=Dca30272.1.exon2;Parent=Dca30272.1 |
| scaffold3018 |
Augustus |
exon |
35643 |
35688 |
. |
+ |
. |
ID=Dca30272.1.exon3;Parent=Dca30272.1 |
| scaffold3018 |
Augustus |
exon |
35954 |
37001 |
. |
+ |
. |
ID=Dca30272.1.exon4;Parent=Dca30272.1 |
