Dca304.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10005)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca304.1 |
29 |
295 |
865 |
9.24 |
267 |
30 |
1e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
273 |
1501 |
16.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca304.1 |
294 |
863 |
865 |
24.85 |
570 |
37 |
1e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
568 |
1134 |
1539 |
36.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10005 |
Augustus |
mRNA |
1 |
3523 |
. |
- |
. |
ID=Dca304.1;Parent=Dca304 |
| scaffold10005 |
Augustus |
exon |
1 |
1464 |
. |
- |
. |
ID=Dca304.1.exon1;Parent=Dca304.1 |
| scaffold10005 |
Augustus |
exon |
1562 |
1815 |
. |
- |
. |
ID=Dca304.1.exon2;Parent=Dca304.1 |
| scaffold10005 |
Augustus |
exon |
2647 |
3523 |
. |
- |
. |
ID=Dca304.1.exon3;Parent=Dca304.1 |
