Carnation DB

Dca30440.1

Annotation

7-exons
f-1
sp|B9HDF9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818968#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Repeat List (scaffold304)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30440.1	22	590	592	58.78	569	60	5e-179
Target_name	Start	End	Length	Cov(%)
sp\|B9HDF9_POPTR	2	554	556	99.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30440.1	4	464	592	50.84	461	63	1e-167
Target_name	Start	End	Length	Cov(%)
AT3G22330.1	3	480	616	77.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold304	Augus-PASA	mRNA	21627	25308	.	-	.	ID=Dca30440.1;Parent=Dca30440
scaffold304	Augus-PASA	exon	21627	22034	.	-	.	ID=Dca30440.1.exon1;Parent=Dca30440.1
scaffold304	Augus-PASA	exon	22408	22569	.	-	.	ID=Dca30440.1.exon2;Parent=Dca30440.1
scaffold304	Augus-PASA	exon	23399	23626	.	-	.	ID=Dca30440.1.exon3;Parent=Dca30440.1
scaffold304	Augus-PASA	exon	23711	23809	.	-	.	ID=Dca30440.1.exon4;Parent=Dca30440.1
scaffold304	Augustus	exon	23929	24337	.	-	.	ID=Dca30440.1.exon5;Parent=Dca30440.1
scaffold304	Augus-PASA	exon	24436	24563	.	-	.	ID=Dca30440.1.exon6;Parent=Dca30440.1
scaffold304	Augus-PASA	exon	24964	25308	.	-	.	ID=Dca30440.1.exon7;Parent=Dca30440.1