Carnation DB

Dca30472.1

Annotation

7-exons
f-1
sp|F4NCJ0_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold3042)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30472.1	415	600	603	9.28	186	30	9e-12
Target_name	Start	End	Length	Cov(%)
sp\|F4NCJ0_BETVU	918	1093	1355	12.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30472.1	287	421	603	8.29	135	31	2e-18
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	367	528	857	18.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3042	Augustus	mRNA	28609	33779	.	+	.	ID=Dca30472.1;Parent=Dca30472
scaffold3042	Augustus	exon	28609	28757	.	+	.	ID=Dca30472.1.exon1;Parent=Dca30472.1
scaffold3042	Augustus	exon	28880	29003	.	+	.	ID=Dca30472.1.exon2;Parent=Dca30472.1
scaffold3042	Augustus	exon	29478	29597	.	+	.	ID=Dca30472.1.exon3;Parent=Dca30472.1
scaffold3042	Augustus	exon	29915	30275	.	+	.	ID=Dca30472.1.exon4;Parent=Dca30472.1
scaffold3042	Augustus	exon	31715	31899	.	+	.	ID=Dca30472.1.exon5;Parent=Dca30472.1
scaffold3042	Augustus	exon	31981	32283	.	+	.	ID=Dca30472.1.exon6;Parent=Dca30472.1
scaffold3042	Augustus	exon	33210	33779	.	+	.	ID=Dca30472.1.exon7;Parent=Dca30472.1