Dca30539.1
Annotation
- 3-exons
- f-1
- sp|D7L1R5_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_673224#unknown#0F0P0C
- AT3G22590.1 | Symbols: PHP, CDC73 | PLANT HOMOLOGOUS TO PARAFIBROMIN | chr3:8003999-8005452 FORWARD LENGTH=415
- Repeat List (scaffold3051)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30539.1 |
1 |
388 |
388 |
63.91 |
388 |
60 |
2e-132
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L1R5_ARALL |
1 |
412 |
414 |
99.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30539.1 |
1 |
388 |
388 |
63.65 |
388 |
60 |
4e-132
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G22590.1 |
1 |
413 |
415 |
99.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3051 |
Augustus |
mRNA |
22443 |
24463 |
. |
+ |
. |
ID=Dca30539.1;Parent=Dca30539 |
| scaffold3051 |
Augustus |
exon |
22443 |
23436 |
. |
+ |
. |
ID=Dca30539.1.exon1;Parent=Dca30539.1 |
| scaffold3051 |
Augustus |
exon |
24125 |
24207 |
. |
+ |
. |
ID=Dca30539.1.exon2;Parent=Dca30539.1 |
| scaffold3051 |
Augustus |
exon |
24374 |
24463 |
. |
+ |
. |
ID=Dca30539.1.exon3;Parent=Dca30539.1 |
