Dca30550.1
Annotation
- 3-exons
- f-1
- sp|A5B7F1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_018508#GO:0005524;GO:0003677;GO:0006260#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold3053)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30550.1 |
344 |
442 |
640 |
8.59 |
99 |
56 |
4e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B7F1_VITVI |
207 |
305 |
1096 |
9.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30550.1 |
75 |
321 |
640 |
13.28 |
247 |
34 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
537 |
765 |
1401 |
16.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3053 |
Augustus |
mRNA |
29091 |
33705 |
. |
+ |
. |
ID=Dca30550.1;Parent=Dca30550 |
| scaffold3053 |
Augustus |
exon |
29091 |
29512 |
. |
+ |
. |
ID=Dca30550.1.exon1;Parent=Dca30550.1 |
| scaffold3053 |
Augustus |
exon |
31438 |
32085 |
. |
+ |
. |
ID=Dca30550.1.exon2;Parent=Dca30550.1 |
| scaffold3053 |
Augustus |
exon |
32853 |
33705 |
. |
+ |
. |
ID=Dca30550.1.exon3;Parent=Dca30550.1 |
