Dca30556.1
Annotation
- 4-exons
- f-1
- sp|B9ILQ8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_779340#GO:0048046;GO:0005618;GO:0004553;GO:0016762;GO:0006073#2F1P2C
- Os06t0696400-01 Xyloglycan endo-transglycosylase precursor.
- Repeat List (scaffold3054)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30556.1 |
1 |
295 |
295 |
49.15 |
295 |
49 |
2e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9ILQ8_POPTR |
1 |
291 |
291 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30556.1 |
4 |
292 |
295 |
49.15 |
289 |
49 |
5e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0696400-01 |
1 |
292 |
294 |
99.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3054 |
Augustus |
mRNA |
58149 |
59442 |
. |
+ |
. |
ID=Dca30556.1;Parent=Dca30556 |
| scaffold3054 |
Augustus |
exon |
58149 |
58317 |
. |
+ |
. |
ID=Dca30556.1.exon1;Parent=Dca30556.1 |
| scaffold3054 |
Augustus |
exon |
58519 |
58619 |
. |
+ |
. |
ID=Dca30556.1.exon2;Parent=Dca30556.1 |
| scaffold3054 |
Augustus |
exon |
58713 |
58909 |
. |
+ |
. |
ID=Dca30556.1.exon3;Parent=Dca30556.1 |
| scaffold3054 |
Augustus |
exon |
59022 |
59442 |
. |
+ |
. |
ID=Dca30556.1.exon4;Parent=Dca30556.1 |
