Dca30634.1
Annotation
- 2-exons
- f-1
- sp|Q336W4_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g39530#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3066)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30634.1 |
1 |
291 |
306 |
40.84 |
291 |
42 |
4e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q336W4_ORYSJ |
672 |
955 |
1414 |
20.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30634.1 |
11 |
120 |
306 |
18.3 |
110 |
51 |
5e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0380700-01 |
40 |
149 |
174 |
63.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3066 |
Augustus |
mRNA |
4531 |
7168 |
. |
+ |
. |
ID=Dca30634.1;Parent=Dca30634 |
| scaffold3066 |
Augustus |
exon |
4531 |
4554 |
. |
+ |
. |
ID=Dca30634.1.exon1;Parent=Dca30634.1 |
| scaffold3066 |
Augustus |
exon |
6272 |
7168 |
. |
+ |
. |
ID=Dca30634.1.exon2;Parent=Dca30634.1 |
