Carnation DB

Dca30639.1

Annotation

9-exons
f-1
sp|O82722_NICSY#ATP synthase subunit beta#Nicotiana sylvestris (Wood tobacco) (South American tobacco)#Name=nsatp2.2.1#GO:0000275;GO:0005524;GO:0046933;GO:0008553;GO:0046961;GO:0015991;GO:0015986#4F2P1C
Repeat List (scaffold3067)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30639.1	1	553	553	87.88	553	88	0
Target_name	Start	End	Length	Cov(%)
sp\|O82722_NICSY	1	556	556	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30639.1	1	553	553	86.79	553	87	0
Target_name	Start	End	Length	Cov(%)
Os01t0685800-01	1	557	558	99.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3067	Augustus	mRNA	27812	32744	.	-	.	ID=Dca30639.1;Parent=Dca30639
scaffold3067	Augustus	exon	27812	27925	.	-	.	ID=Dca30639.1.exon1;Parent=Dca30639.1
scaffold3067	Augustus	exon	28049	28360	.	-	.	ID=Dca30639.1.exon2;Parent=Dca30639.1
scaffold3067	Augustus	exon	29296	29520	.	-	.	ID=Dca30639.1.exon3;Parent=Dca30639.1
scaffold3067	Augus-PASA	exon	29819	29977	.	-	.	ID=Dca30639.1.exon4;Parent=Dca30639.1
scaffold3067	Augus-PASA	exon	30063	30166	.	-	.	ID=Dca30639.1.exon5;Parent=Dca30639.1
scaffold3067	Augus-PASA	exon	30245	30362	.	-	.	ID=Dca30639.1.exon6;Parent=Dca30639.1
scaffold3067	Augus-PASA	exon	31281	31369	.	-	.	ID=Dca30639.1.exon7;Parent=Dca30639.1
scaffold3067	Augus-PASA	exon	31464	31539	.	-	.	ID=Dca30639.1.exon8;Parent=Dca30639.1
scaffold3067	Augus-PASA	exon	32280	32744	.	-	.	ID=Dca30639.1.exon9;Parent=Dca30639.1