Dca30660.1
Annotation
- 4-exons
- f-1
- sp|D7T0S0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0065g01010#GO:0005634;GO:0003677;GO:0008270#2F0P1C
- sp|B9N851_POPTR#Methyl binding domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=MBD901#GO:0005634;GO:0003677;GO:0008270#2F0P1C
- Repeat List (scaffold307)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30660.1 |
31 |
321 |
321 |
50.77 |
291 |
53 |
3e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7T0S0_VITVI |
54 |
354 |
354 |
85.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30660.1 |
33 |
299 |
321 |
44.54 |
267 |
53 |
6e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G35330.1 |
16 |
269 |
272 |
93.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold307 |
Augus-PASA |
mRNA |
122187 |
125059 |
. |
+ |
. |
ID=Dca30660.1;Parent=Dca30660 |
| scaffold307 |
Augus-PASA |
exon |
122187 |
122722 |
. |
+ |
. |
ID=Dca30660.1.exon1;Parent=Dca30660.1 |
| scaffold307 |
Augus-PASA |
exon |
123941 |
123994 |
. |
+ |
. |
ID=Dca30660.1.exon2;Parent=Dca30660.1 |
| scaffold307 |
Augus-PASA |
exon |
124109 |
124251 |
. |
+ |
. |
ID=Dca30660.1.exon3;Parent=Dca30660.1 |
| scaffold307 |
Augus-PASA |
exon |
124827 |
125059 |
. |
+ |
. |
ID=Dca30660.1.exon4;Parent=Dca30660.1 |
