Dca30758.1
Annotation
- 4-exons
- f-1
- sp|D7L4V3_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_479007#unknown#0F0P0C
- AT3G15580.1 | Symbols: ATG8I, APG8H | Ubiquitin-like superfamily protein | chr3:5274075-5275000 REVERSE LENGTH=115
- Repeat List (scaffold3084)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30758.1 |
74 |
144 |
158 |
34.81 |
71 |
78 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L4V3_ARALL |
45 |
115 |
115 |
61.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30758.1 |
74 |
144 |
158 |
34.17 |
71 |
77 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G15580.1 |
45 |
115 |
115 |
61.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3084 |
Augustus |
mRNA |
1519 |
6295 |
. |
+ |
. |
ID=Dca30758.1;Parent=Dca30758 |
| scaffold3084 |
Augustus |
exon |
1519 |
1575 |
. |
+ |
. |
ID=Dca30758.1.exon1;Parent=Dca30758.1 |
| scaffold3084 |
Augustus |
exon |
1754 |
1923 |
. |
+ |
. |
ID=Dca30758.1.exon2;Parent=Dca30758.1 |
| scaffold3084 |
Augustus |
exon |
5956 |
6074 |
. |
+ |
. |
ID=Dca30758.1.exon3;Parent=Dca30758.1 |
| scaffold3084 |
Augustus |
exon |
6165 |
6295 |
. |
+ |
. |
ID=Dca30758.1.exon4;Parent=Dca30758.1 |
