Carnation DB

Dca30832.1

Annotation

11-exons
f-1
sp|B9IQ65_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826211#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:16976783-16979392 FORWARD LENGTH=609
Repeat List (scaffold3096)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30832.1	18	540	546	71.42	523	69	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IQ65_POPTR	16	587	594	96.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30832.1	2	529	546	64.1	528	61	0
Target_name	Start	End	Length	Cov(%)
AT2G40700.1	7	585	609	95.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3096	Augus-PASA	mRNA	9453	14999	.	+	.	ID=Dca30832.1;Parent=Dca30832
scaffold3096	Augus-PASA	exon	9453	9570	.	+	.	ID=Dca30832.1.exon1;Parent=Dca30832.1
scaffold3096	Augus-PASA	exon	9692	9764	.	+	.	ID=Dca30832.1.exon2;Parent=Dca30832.1
scaffold3096	Augus-PASA	exon	10568	10671	.	+	.	ID=Dca30832.1.exon3;Parent=Dca30832.1
scaffold3096	Augus-PASA	exon	11652	11795	.	+	.	ID=Dca30832.1.exon4;Parent=Dca30832.1
scaffold3096	Augus-PASA	exon	12043	12151	.	+	.	ID=Dca30832.1.exon5;Parent=Dca30832.1
scaffold3096	Augustus	exon	12238	12560	.	+	.	ID=Dca30832.1.exon6;Parent=Dca30832.1
scaffold3096	Augustus	exon	12655	12728	.	+	.	ID=Dca30832.1.exon7;Parent=Dca30832.1
scaffold3096	Augustus	exon	13340	13644	.	+	.	ID=Dca30832.1.exon8;Parent=Dca30832.1
scaffold3096	Augustus	exon	14114	14208	.	+	.	ID=Dca30832.1.exon9;Parent=Dca30832.1
scaffold3096	Augustus	exon	14319	14359	.	+	.	ID=Dca30832.1.exon10;Parent=Dca30832.1
scaffold3096	Augustus	exon	14745	14999	.	+	.	ID=Dca30832.1.exon11;Parent=Dca30832.1