Carnation DB

Dca30840.1

Annotation

5-exons
f-1
sp|Q43833_SOLTU#Glyceraldehyde 3-phosphate dehydrogenase#Solanum tuberosum (Potato)#Name=GAPDH#GO:0004365;GO:0051287;GO:0050661;GO:0006006#3F1P0C
Repeat List (scaffold3097)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30840.1	148	188	237	15.18	41	88	4e-15
Target_name	Start	End	Length	Cov(%)
sp\|Q43833_SOLTU	32	72	300	13.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30840.1	148	188	237	14.34	41	83	6e-15
Target_name	Start	End	Length	Cov(%)
AT1G13440.1	46	86	338	12.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3097	Augustus	mRNA	58885	60788	.	+	.	ID=Dca30840.1;Parent=Dca30840
scaffold3097	Augustus	exon	58885	58902	.	+	.	ID=Dca30840.1.exon1;Parent=Dca30840.1
scaffold3097	Augustus	exon	59003	59425	.	+	.	ID=Dca30840.1.exon2;Parent=Dca30840.1
scaffold3097	Augustus	exon	59504	59619	.	+	.	ID=Dca30840.1.exon3;Parent=Dca30840.1
scaffold3097	Augustus	exon	60218	60295	.	+	.	ID=Dca30840.1.exon4;Parent=Dca30840.1
scaffold3097	Augustus	exon	60710	60788	.	+	.	ID=Dca30840.1.exon5;Parent=Dca30840.1