Carnation DB

Dca30995.1

Annotation

6-exons
f-1
sp|B9T038_RICCO#Calcium-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1144940#GO:0005488#1F0P0C
Repeat List (scaffold311)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30995.1	90	192	194	25.77	103	49	4e-20
Target_name	Start	End	Length	Cov(%)
sp\|B9T038_RICCO	341	443	445	23.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30995.1	90	193	194	27.83	104	52	1e-22
Target_name	Start	End	Length	Cov(%)
AT5G47540.1	239	342	343	30.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold311	Augustus	mRNA	35014	39845	.	+	.	ID=Dca30995.1;Parent=Dca30995
scaffold311	Augustus	exon	35014	35130	.	+	.	ID=Dca30995.1.exon1;Parent=Dca30995.1
scaffold311	Augustus	exon	36025	36143	.	+	.	ID=Dca30995.1.exon2;Parent=Dca30995.1
scaffold311	Augustus	exon	36470	36544	.	+	.	ID=Dca30995.1.exon3;Parent=Dca30995.1
scaffold311	Augustus	exon	37205	37298	.	+	.	ID=Dca30995.1.exon4;Parent=Dca30995.1
scaffold311	Augustus	exon	39519	39621	.	+	.	ID=Dca30995.1.exon5;Parent=Dca30995.1
scaffold311	Augustus	exon	39769	39845	.	+	.	ID=Dca30995.1.exon6;Parent=Dca30995.1