Dca3111.1
Annotation
- 4-exons
- f-1
- sp|D7SQJ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0141g00260#GO:0003697;GO:0006260#1F1P0C
- Os03t0633900-01 Nucleic acid-binding, OB-fold-like domain containing protein.
- Repeat List (scaffold111)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3111.1 |
77 |
231 |
236 |
35.16 |
155 |
54 |
1e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7SQJ9_VITVI |
65 |
214 |
286 |
52.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3111.1 |
78 |
208 |
236 |
26.27 |
131 |
48 |
5e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0633900-01 |
66 |
194 |
312 |
41.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold111 |
Augus-PASA |
mRNA |
115343 |
117816 |
. |
- |
. |
ID=Dca3111.1;Parent=Dca3111 |
| scaffold111 |
Augus-PASA |
exon |
115343 |
115437 |
. |
- |
. |
ID=Dca3111.1.exon1;Parent=Dca3111.1 |
| scaffold111 |
Augus-PASA |
exon |
115535 |
115622 |
. |
- |
. |
ID=Dca3111.1.exon2;Parent=Dca3111.1 |
| scaffold111 |
Augus-PASA |
exon |
115706 |
115844 |
. |
- |
. |
ID=Dca3111.1.exon3;Parent=Dca3111.1 |
| scaffold111 |
Augus-PASA |
exon |
117428 |
117816 |
. |
- |
. |
ID=Dca3111.1.exon4;Parent=Dca3111.1 |
