Carnation DB

Dca31495.1

Annotation

6-exons
f-1
sp|Q0WMG9_ARATH#Putative uncharacterized protein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|Q9LVQ1_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold3173)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31495.1	149	709	767	28.16	561	38	2e-105
Target_name	Start	End	Length	Cov(%)
sp\|Q0WMG9_ARATH	8	572	1072	52.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31495.1	149	700	767	22.29	552	30	3e-66
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	68	606	857	62.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3173	Augustus	mRNA	28959	33701	.	-	.	ID=Dca31495.1;Parent=Dca31495
scaffold3173	Augustus	exon	28959	29132	.	-	.	ID=Dca31495.1.exon1;Parent=Dca31495.1
scaffold3173	Augustus	exon	30851	32535	.	-	.	ID=Dca31495.1.exon2;Parent=Dca31495.1
scaffold3173	Augustus	exon	32972	33037	.	-	.	ID=Dca31495.1.exon3;Parent=Dca31495.1
scaffold3173	Augustus	exon	33137	33209	.	-	.	ID=Dca31495.1.exon4;Parent=Dca31495.1
scaffold3173	Augustus	exon	33318	33543	.	-	.	ID=Dca31495.1.exon5;Parent=Dca31495.1
scaffold3173	Augustus	exon	33622	33701	.	-	.	ID=Dca31495.1.exon6;Parent=Dca31495.1