Carnation DB

Dca3154.1

Annotation

9-exons
f-1
sp|B5M1Y3_RHEAU#Putative uncharacterized protein#Rheum australe (Himalayan rhubarb) (Rheum emodi)#unknown#unknown#0F0P0C
sp|G7ILW3_MEDTR#Thioredoxin family protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_2g018310#unknown#0F0P0C
Repeat List (scaffold1111)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3154.1	1	204	204	89.21	204	90	4e-110
Target_name	Start	End	Length	Cov(%)
sp\|B5M1Y3_RHEAU	1	204	204	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3154.1	1	204	204	82.35	204	83	1e-102
Target_name	Start	End	Length	Cov(%)
Os01t0559000-01	1	204	205	99.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1111	Augus-PASA	mRNA	51371	54302	.	+	.	ID=Dca3154.1;Parent=Dca3154
scaffold1111	Augus-PASA	exon	51371	51454	.	+	.	ID=Dca3154.1.exon1;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	52539	52619	.	+	.	ID=Dca3154.1.exon2;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	52760	52809	.	+	.	ID=Dca3154.1.exon3;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	52889	52966	.	+	.	ID=Dca3154.1.exon4;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	53180	53237	.	+	.	ID=Dca3154.1.exon5;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	53349	53398	.	+	.	ID=Dca3154.1.exon6;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	53500	53608	.	+	.	ID=Dca3154.1.exon7;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	53719	53780	.	+	.	ID=Dca3154.1.exon8;Parent=Dca3154.1
scaffold1111	Augus-PASA	exon	54260	54302	.	+	.	ID=Dca3154.1.exon9;Parent=Dca3154.1