Carnation DB

Dca31565.1

Annotation

13-exons
f-1
sp|B9HWL3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_769685#unknown#0F0P0C
AT1G25540.1 | Symbols: PFT1 | phytochrome and flowering time regulatory protein (PFT1) | chr1:8969392-8974446 REVERSE LENGTH=836
Repeat List (scaffold3182)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31565.1	14	638	815	47.73	625	60	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HWL3_POPTR	41	685	796	81.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31565.1	13	639	815	44.04	627	56	5e-177
Target_name	Start	End	Length	Cov(%)
AT1G25540.1	51	679	836	75.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3182	Augustus	mRNA	24318	31149	.	-	.	ID=Dca31565.1;Parent=Dca31565
scaffold3182	Augustus	exon	24318	24878	.	-	.	ID=Dca31565.1.exon1;Parent=Dca31565.1
scaffold3182	Augustus	exon	25043	25129	.	-	.	ID=Dca31565.1.exon2;Parent=Dca31565.1
scaffold3182	Augustus	exon	25478	25562	.	-	.	ID=Dca31565.1.exon3;Parent=Dca31565.1
scaffold3182	Augustus	exon	25737	25805	.	-	.	ID=Dca31565.1.exon4;Parent=Dca31565.1
scaffold3182	Augustus	exon	26169	26197	.	-	.	ID=Dca31565.1.exon5;Parent=Dca31565.1
scaffold3182	Augustus	exon	26286	26339	.	-	.	ID=Dca31565.1.exon6;Parent=Dca31565.1
scaffold3182	Augustus	exon	26593	27414	.	-	.	ID=Dca31565.1.exon7;Parent=Dca31565.1
scaffold3182	Augustus	exon	27503	27570	.	-	.	ID=Dca31565.1.exon8;Parent=Dca31565.1
scaffold3182	Augustus	exon	28123	28303	.	-	.	ID=Dca31565.1.exon9;Parent=Dca31565.1
scaffold3182	Augustus	exon	28747	28812	.	-	.	ID=Dca31565.1.exon10;Parent=Dca31565.1
scaffold3182	Augustus	exon	28919	29128	.	-	.	ID=Dca31565.1.exon11;Parent=Dca31565.1
scaffold3182	Augustus	exon	30483	30613	.	-	.	ID=Dca31565.1.exon12;Parent=Dca31565.1
scaffold3182	Augustus	exon	31065	31149	.	-	.	ID=Dca31565.1.exon13;Parent=Dca31565.1