Carnation DB

Dca31594.1

Annotation

5-exons
f-1
sp|F6HQF8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0063g01460#GO:0009512;GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P2C
Os11t0197600-01 Transcriptional factor B3 family protein.
Repeat List (scaffold3188)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31594.1	63	146	282	9.57	84	33	1e-07
Target_name	Start	End	Length	Cov(%)
sp\|F6HQF8_VITVI	312	395	1171	7.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31594.1	49	144	282	12.76	96	36	1e-11
Target_name	Start	End	Length	Cov(%)
AT5G66980.1	10	109	334	29.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3188	Augustus	mRNA	12401	15592	.	+	.	ID=Dca31594.1;Parent=Dca31594
scaffold3188	Augustus	exon	12401	12482	.	+	.	ID=Dca31594.1.exon1;Parent=Dca31594.1
scaffold3188	Augustus	exon	13619	13722	.	+	.	ID=Dca31594.1.exon2;Parent=Dca31594.1
scaffold3188	Augustus	exon	14745	15039	.	+	.	ID=Dca31594.1.exon3;Parent=Dca31594.1
scaffold3188	Augustus	exon	15122	15213	.	+	.	ID=Dca31594.1.exon4;Parent=Dca31594.1
scaffold3188	Augustus	exon	15317	15592	.	+	.	ID=Dca31594.1.exon5;Parent=Dca31594.1