Carnation DB

Dca31617.1

Annotation

7-exons
f-466
sp|B9HU09_POPTR#AP2 domain-containing transcription factor#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=RAP4#GO:0005634;GO:0003677;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold319)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31617.1	1	228	233	40.34	228	40	4e-33
Target_name	Start	End	Length	Cov(%)
sp\|B9HU09_POPTR	232	463	487	47.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31617.1	1	184	233	34.76	184	41	3e-28
Target_name	Start	End	Length	Cov(%)
Os05t0121600-01	235	429	513	38.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold319	Augustus	mRNA	169567	173841	.	+	.	ID=Dca31617.1;Parent=Dca31617
scaffold319	Augustus	exon	169567	169952	.	+	.	ID=Dca31617.1.exon1;Parent=Dca31617.1
scaffold319	Augustus	exon	170816	170903	.	+	.	ID=Dca31617.1.exon2;Parent=Dca31617.1
scaffold319	Augustus	exon	171017	171162	.	+	.	ID=Dca31617.1.exon3;Parent=Dca31617.1
scaffold319	Augustus	exon	172341	172447	.	+	.	ID=Dca31617.1.exon4;Parent=Dca31617.1
scaffold319	Augustus	exon	172550	172689	.	+	.	ID=Dca31617.1.exon5;Parent=Dca31617.1
scaffold319	Augustus	exon	172836	172955	.	+	.	ID=Dca31617.1.exon6;Parent=Dca31617.1
scaffold319	Augustus	exon	173662	173841	.	+	.	ID=Dca31617.1.exon7;Parent=Dca31617.1