Carnation DB

Dca31700.1

Annotation

24-exons
f-1
sp|B9GKC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_797347#GO:0004553;GO:0005975#1F1P0C
sp|Q43149_SAMNI#Cellulase#Sambucus nigra (European elder)#unknown#GO:0008810;GO:0005975#1F1P0C
Repeat List (scaffold32)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31700.1	865	1303	1329	23.1	439	70	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GKC9_POPTR	26	464	483	90.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31700.1	865	1306	1329	21.82	442	66	5e-171
Target_name	Start	End	Length	Cov(%)
AT4G23560.1	37	477	479	92.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold32	Augus-PASA	mRNA	160651	173892	.	+	.	ID=Dca31700.1;Parent=Dca31700
scaffold32	Augus-PASA	exon	160651	160829	.	+	.	ID=Dca31700.1.exon1;Parent=Dca31700.1
scaffold32	Augus-PASA	exon	162074	162146	.	+	.	ID=Dca31700.1.exon2;Parent=Dca31700.1
scaffold32	Augus-PASA	exon	162586	162651	.	+	.	ID=Dca31700.1.exon3;Parent=Dca31700.1
scaffold32	Augus-PASA	exon	162814	162879	.	+	.	ID=Dca31700.1.exon4;Parent=Dca31700.1
scaffold32	Augustus	exon	163000	163082	.	+	.	ID=Dca31700.1.exon5;Parent=Dca31700.1
scaffold32	Augustus	exon	163478	163529	.	+	.	ID=Dca31700.1.exon6;Parent=Dca31700.1
scaffold32	Augustus	exon	163676	163747	.	+	.	ID=Dca31700.1.exon7;Parent=Dca31700.1
scaffold32	Augustus	exon	164360	164427	.	+	.	ID=Dca31700.1.exon8;Parent=Dca31700.1
scaffold32	Augustus	exon	164553	164601	.	+	.	ID=Dca31700.1.exon9;Parent=Dca31700.1
scaffold32	Augustus	exon	164691	164775	.	+	.	ID=Dca31700.1.exon10;Parent=Dca31700.1
scaffold32	Augustus	exon	164869	164964	.	+	.	ID=Dca31700.1.exon11;Parent=Dca31700.1
scaffold32	Augustus	exon	165607	165670	.	+	.	ID=Dca31700.1.exon12;Parent=Dca31700.1
scaffold32	Augustus	exon	166088	166139	.	+	.	ID=Dca31700.1.exon13;Parent=Dca31700.1
scaffold32	Augustus	exon	166284	166400	.	+	.	ID=Dca31700.1.exon14;Parent=Dca31700.1
scaffold32	Augustus	exon	166484	167344	.	+	.	ID=Dca31700.1.exon15;Parent=Dca31700.1
scaffold32	Augustus	exon	167735	168344	.	+	.	ID=Dca31700.1.exon16;Parent=Dca31700.1
scaffold32	Augustus	exon	170328	170410	.	+	.	ID=Dca31700.1.exon17;Parent=Dca31700.1
scaffold32	Augustus	exon	170842	171054	.	+	.	ID=Dca31700.1.exon18;Parent=Dca31700.1
scaffold32	Augustus	exon	171252	171452	.	+	.	ID=Dca31700.1.exon19;Parent=Dca31700.1
scaffold32	Augustus	exon	171544	171621	.	+	.	ID=Dca31700.1.exon20;Parent=Dca31700.1
scaffold32	Augustus	exon	171713	171865	.	+	.	ID=Dca31700.1.exon21;Parent=Dca31700.1
scaffold32	Augustus	exon	172599	172707	.	+	.	ID=Dca31700.1.exon22;Parent=Dca31700.1
scaffold32	Augustus	exon	172796	172962	.	+	.	ID=Dca31700.1.exon23;Parent=Dca31700.1
scaffold32	Augustus	exon	173500	173892	.	+	.	ID=Dca31700.1.exon24;Parent=Dca31700.1