Carnation DB

Dca3174.1

Annotation

20-exons
f-1
sp|A8YPK5_MESCR#Sodium/hydrogen exchanger#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=nhx3#GO:0016021;GO:0015385;GO:0006885#1F1P1C
Repeat List (scaffold1112)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3174.1	431	648	660	25.6	218	77	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|A8YPK5_MESCR	251	468	549	39.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3174.1	431	646	660	21.66	216	67	2e-77
Target_name	Start	End	Length	Cov(%)
Os07t0666900-02	246	457	536	39.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1112	Augustus	mRNA	19966	26462	.	+	.	ID=Dca3174.1;Parent=Dca3174
scaffold1112	Augustus	exon	19966	20018	.	+	.	ID=Dca3174.1.exon1;Parent=Dca3174.1
scaffold1112	Augustus	exon	21021	21118	.	+	.	ID=Dca3174.1.exon2;Parent=Dca3174.1
scaffold1112	Augustus	exon	21351	21410	.	+	.	ID=Dca3174.1.exon3;Parent=Dca3174.1
scaffold1112	Augustus	exon	21496	21542	.	+	.	ID=Dca3174.1.exon4;Parent=Dca3174.1
scaffold1112	Augustus	exon	21644	21838	.	+	.	ID=Dca3174.1.exon5;Parent=Dca3174.1
scaffold1112	Augustus	exon	21952	21998	.	+	.	ID=Dca3174.1.exon6;Parent=Dca3174.1
scaffold1112	Augustus	exon	22177	22243	.	+	.	ID=Dca3174.1.exon7;Parent=Dca3174.1
scaffold1112	Augustus	exon	22672	22772	.	+	.	ID=Dca3174.1.exon8;Parent=Dca3174.1
scaffold1112	Augustus	exon	22885	22986	.	+	.	ID=Dca3174.1.exon9;Parent=Dca3174.1
scaffold1112	Augustus	exon	23093	23231	.	+	.	ID=Dca3174.1.exon10;Parent=Dca3174.1
scaffold1112	Augustus	exon	23320	23382	.	+	.	ID=Dca3174.1.exon11;Parent=Dca3174.1
scaffold1112	Augustus	exon	23465	23551	.	+	.	ID=Dca3174.1.exon12;Parent=Dca3174.1
scaffold1112	Augustus	exon	23694	23926	.	+	.	ID=Dca3174.1.exon13;Parent=Dca3174.1
scaffold1112	Augustus	exon	24749	24815	.	+	.	ID=Dca3174.1.exon14;Parent=Dca3174.1
scaffold1112	Augustus	exon	25295	25395	.	+	.	ID=Dca3174.1.exon15;Parent=Dca3174.1
scaffold1112	Augustus	exon	25523	25624	.	+	.	ID=Dca3174.1.exon16;Parent=Dca3174.1
scaffold1112	Augustus	exon	25731	25869	.	+	.	ID=Dca3174.1.exon17;Parent=Dca3174.1
scaffold1112	Augustus	exon	25957	26019	.	+	.	ID=Dca3174.1.exon18;Parent=Dca3174.1
scaffold1112	Augustus	exon	26102	26188	.	+	.	ID=Dca3174.1.exon19;Parent=Dca3174.1
scaffold1112	Augustus	exon	26331	26462	.	+	.	ID=Dca3174.1.exon20;Parent=Dca3174.1