Dca31745.1
Annotation
- 4-exons
- f-1
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold320)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31745.1 |
394 |
752 |
756 |
27.11 |
359 |
56 |
2e-116
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q850U9_ORYSJ |
177 |
545 |
547 |
67.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31745.1 |
628 |
735 |
756 |
5.82 |
108 |
41 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1273 |
1378 |
1401 |
7.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold320 |
Augustus |
mRNA |
141650 |
150103 |
. |
+ |
. |
ID=Dca31745.1;Parent=Dca31745 |
| scaffold320 |
Augustus |
exon |
141650 |
142454 |
. |
+ |
. |
ID=Dca31745.1.exon1;Parent=Dca31745.1 |
| scaffold320 |
Augustus |
exon |
142872 |
143302 |
. |
+ |
. |
ID=Dca31745.1.exon2;Parent=Dca31745.1 |
| scaffold320 |
Augustus |
exon |
144139 |
144782 |
. |
+ |
. |
ID=Dca31745.1.exon3;Parent=Dca31745.1 |
| scaffold320 |
Augustus |
exon |
149713 |
150103 |
. |
+ |
. |
ID=Dca31745.1.exon4;Parent=Dca31745.1 |
