Carnation DB

Dca31849.1

Annotation

10-exons
f-1
sp|D7SP24_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g03060#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
sp|B9R839_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1596550#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
Repeat List (scaffold3216)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31849.1	572	1003	1009	16.35	432	38	3e-65
Target_name	Start	End	Length	Cov(%)
sp\|D7SP24_VITVI	547	966	973	43.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31849.1	662	1000	1009	12.98	339	36	7e-45
Target_name	Start	End	Length	Cov(%)
Os08t0547500-01	707	1032	1038	31.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3216	Augustus	mRNA	20841	25216	.	+	.	ID=Dca31849.1;Parent=Dca31849
scaffold3216	Augustus	exon	20841	20969	.	+	.	ID=Dca31849.1.exon1;Parent=Dca31849.1
scaffold3216	Augustus	exon	21064	21177	.	+	.	ID=Dca31849.1.exon2;Parent=Dca31849.1
scaffold3216	Augustus	exon	21297	21378	.	+	.	ID=Dca31849.1.exon3;Parent=Dca31849.1
scaffold3216	Augustus	exon	21475	21542	.	+	.	ID=Dca31849.1.exon4;Parent=Dca31849.1
scaffold3216	Augustus	exon	21636	21698	.	+	.	ID=Dca31849.1.exon5;Parent=Dca31849.1
scaffold3216	Augustus	exon	21797	21921	.	+	.	ID=Dca31849.1.exon6;Parent=Dca31849.1
scaffold3216	Augustus	exon	22036	22372	.	+	.	ID=Dca31849.1.exon7;Parent=Dca31849.1
scaffold3216	Augustus	exon	22480	23904	.	+	.	ID=Dca31849.1.exon8;Parent=Dca31849.1
scaffold3216	Augustus	exon	24128	24489	.	+	.	ID=Dca31849.1.exon9;Parent=Dca31849.1
scaffold3216	Augustus	exon	24892	25216	.	+	.	ID=Dca31849.1.exon10;Parent=Dca31849.1